Index

A

add_parameter() (symbolic_compartmental_model.symbolic_compartmental_model.SymbolicCompartmentalModel method) age_cdf_sympy() (symbolic_compartmental_model.symbolic_compartmental_model.SymbolicCompartmentalModel method) age_pdf_sympy() (symbolic_compartmental_model.symbolic_compartmental_model.SymbolicCompartmentalModel method)

ages_cdf_sympy() (symbolic_compartmental_model.symbolic_compartmental_model.SymbolicCompartmentalModel method) ages_pdf_sympy() (symbolic_compartmental_model.symbolic_compartmental_model.SymbolicCompartmentalModel method) as_lambda() (symbolic_compartmental_model.symbolic_compartmental_model.SymbolicCompartmentalModel method) as_symbolic() (symbolic_compartmental_model.symbolic_compartmental_model.SymbolicCompartmentalModel method)

C

check_param_index() (symbolic_compartmental_model.symbolic_compartmental_model.SymbolicCompartmentalModel method) check_state_index() (symbolic_compartmental_model.symbolic_compartmental_model.SymbolicCompartmentalModel method)

clone() (symbolic_compartmental_model.symbolic_compartmental_model.SymbolicCompartmentalModel method) cohort_mean_residence_time_sympy() (symbolic_compartmental_model.symbolic_compartmental_model.SymbolicCompartmentalModel method) contributed_turnovers (symbolic_compartmental_model.symbolic_compartmental_model.SymbolicCompartmentalModel property)

D

decay_rate_sympy() (symbolic_compartmental_model.symbolic_compartmental_model.SymbolicCompartmentalModel method)

display_bounds() (symbolic_compartmental_model.symbolic_compartmental_model.SymbolicCompartmentalModel method)

E

expected_decay_rate_sympy() (symbolic_compartmental_model.symbolic_compartmental_model.SymbolicCompartmentalModel method)

F

f_sympy() (symbolic_compartmental_model.symbolic_compartmental_model.SymbolicCompartmentalModel method) fddot_sympy() (symbolic_compartmental_model.symbolic_compartmental_model.SymbolicCompartmentalModel method) fdot_sympy() (symbolic_compartmental_model.symbolic_compartmental_model.SymbolicCompartmentalModel method) fdot_zero_sympy() (symbolic_compartmental_model.symbolic_compartmental_model.SymbolicCompartmentalModel method)

fit() (symbolic_compartmental_model.symbolic_compartmental_model.SymbolicCompartmentalModel method) fit_multiple_pools() (symbolic_compartmental_model.symbolic_compartmental_model.SymbolicCompartmentalModel method) fit_whole_system() (symbolic_compartmental_model.symbolic_compartmental_model.SymbolicCompartmentalModel method) from_sbtab() (symbolic_compartmental_model.symbolic_compartmental_model.SymbolicCompartmentalModel class method)

G

get_param() (symbolic_compartmental_model.symbolic_compartmental_model.SymbolicCompartmentalModel method) get_param_bounds() (symbolic_compartmental_model.symbolic_compartmental_model.SymbolicCompartmentalModel method)

get_params() (symbolic_compartmental_model.symbolic_compartmental_model.SymbolicCompartmentalModel method) growth_rate (symbolic_compartmental_model.symbolic_compartmental_model.SymbolicCompartmentalModel property)

H

has_delayed_input() (symbolic_compartmental_model.symbolic_compartmental_model.SymbolicCompartmentalModel method)

I

is_mass_balanced() (symbolic_compartmental_model.symbolic_compartmental_model.SymbolicCompartmentalModel method)

is_valid() (symbolic_compartmental_model.symbolic_compartmental_model.SymbolicCompartmentalModel method)

L

lifespan_of_the_living_cdf_sympy() (symbolic_compartmental_model.symbolic_compartmental_model.SymbolicCompartmentalModel method)

lifespan_of_the_living_pdf_sympy() (symbolic_compartmental_model.symbolic_compartmental_model.SymbolicCompartmentalModel method)

M

M_sympy() (symbolic_compartmental_model.symbolic_compartmental_model.SymbolicCompartmentalModel method) mean_age_sympy() (symbolic_compartmental_model.symbolic_compartmental_model.SymbolicCompartmentalModel method) mean_ages_sympy() (symbolic_compartmental_model.symbolic_compartmental_model.SymbolicCompartmentalModel method) mean_lifespan_of_the_living_sympy() (symbolic_compartmental_model.symbolic_compartmental_model.SymbolicCompartmentalModel method) mean_remaining_lifespan_of_the_living_sympy() (symbolic_compartmental_model.symbolic_compartmental_model.SymbolicCompartmentalModel method) mean_residence_time_sympy() (symbolic_compartmental_model.symbolic_compartmental_model.SymbolicCompartmentalModel method)

minimize_M_given_s() (symbolic_compartmental_model.symbolic_compartmental_model.SymbolicCompartmentalModel method) minimize_multiple_pools() (symbolic_compartmental_model.symbolic_compartmental_model.SymbolicCompartmentalModel method) minimize_s_given_M() (symbolic_compartmental_model.symbolic_compartmental_model.SymbolicCompartmentalModel method) minimize_whole_system() (symbolic_compartmental_model.symbolic_compartmental_model.SymbolicCompartmentalModel method) module symbolic_compartmental_model symbolic_compartmental_model.symbolic_compartmental_model

N

n_params (symbolic_compartmental_model.symbolic_compartmental_model.SymbolicCompartmentalModel property)

n_states (symbolic_compartmental_model.symbolic_compartmental_model.SymbolicCompartmentalModel attribute)

O

observed_pool_weights (symbolic_compartmental_model.symbolic_compartmental_model.SymbolicCompartmentalModel property)

P

parameterize() (symbolic_compartmental_model.symbolic_compartmental_model.SymbolicCompartmentalModel method)

pool_sizes (symbolic_compartmental_model.symbolic_compartmental_model.SymbolicCompartmentalModel property)

R

reduce() (symbolic_compartmental_model.symbolic_compartmental_model.SymbolicCompartmentalModel method) remaining_lifespan_of_the_living_cdf_sympy() (symbolic_compartmental_model.symbolic_compartmental_model.SymbolicCompartmentalModel method) remaining_lifespan_of_the_living_pdf_sympy() (symbolic_compartmental_model.symbolic_compartmental_model.SymbolicCompartmentalModel method) remaining_lifespan_per_age_cdf_sympy() (symbolic_compartmental_model.symbolic_compartmental_model.SymbolicCompartmentalModel method)

remaining_lifespan_per_age_pdf_sympy() (symbolic_compartmental_model.symbolic_compartmental_model.SymbolicCompartmentalModel method) remove_all_parameters() (symbolic_compartmental_model.symbolic_compartmental_model.SymbolicCompartmentalModel method) residence_time_cdf_sympy() (symbolic_compartmental_model.symbolic_compartmental_model.SymbolicCompartmentalModel method) residence_time_pdf_sympy() (symbolic_compartmental_model.symbolic_compartmental_model.SymbolicCompartmentalModel method)

S

s_sympy() (symbolic_compartmental_model.symbolic_compartmental_model.SymbolicCompartmentalModel method) set_contributed_turnover() (symbolic_compartmental_model.symbolic_compartmental_model.SymbolicCompartmentalModel method) set_observed_pool_weight() (symbolic_compartmental_model.symbolic_compartmental_model.SymbolicCompartmentalModel method) set_param_bounds() (symbolic_compartmental_model.symbolic_compartmental_model.SymbolicCompartmentalModel method)

symbolic_compartmental_model module symbolic_compartmental_model.symbolic_compartmental_model module SymbolicCompartmentalModel (class in symbolic_compartmental_model.symbolic_compartmental_model)

V

vf_sympy() (symbolic_compartmental_model.symbolic_compartmental_model.SymbolicCompartmentalModel method) vfddot_sympy() (symbolic_compartmental_model.symbolic_compartmental_model.SymbolicCompartmentalModel method)

vfdot_sympy() (symbolic_compartmental_model.symbolic_compartmental_model.SymbolicCompartmentalModel method) vfdot_zero_sympy() (symbolic_compartmental_model.symbolic_compartmental_model.SymbolicCompartmentalModel method)